Sunday, January 17, 2010

Wild Crows Reveal Tool Skills.

A new study using motion sensitive video cameras has revealed how New Caledonian crows use tools in the wild. (Credit: Copyright University of Oxford.
Source: ScienceDaily
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ScienceDaily (Jan. 17, 2010) — A new study using motion sensitive video cameras has revealed how New Caledonian crows use tools in the wild.
Previous work has shown the sophisticated ways in which crows can use tools in the laboratory, but now a team of scientists from Oxford University and the University of Birmingham have investigated tool use in its full ecological context. The researchers recorded almost 1,800 hours of video footage for the study and published their findings in Proceedings of the Royal Society B.
In the wild, New Caledonian crows use tools for many purposes, including 'fishing out' large beetle larvae from holes in dead wood. In the new study, the team was able to show for the first time that more larvae were extracted by crows using tools than with their beaks.
They also discovered that adult crows appeared to be much more skilled at obtaining larvae than juvenile crows, suggesting that considerable learning -- possibly from copying more experienced 'larvae fishers' -- is required for crows to become competent at this task.
Aside from recording the video footage the team also collected a large sample of tools that crows had left inserted into larvae burrows. By comparing the length of the tools to the burrows, they found that, on average, longer tools are found in deeper burrows -- suggesting that wild crows, like their cousins in the laboratory, are able to match the 'right' tool to the task. The collection also showed that wild crows do not select tools randomly, from debris on the forest floor, but are more likely to choose leaf-stems than twigs, and are more likely to use tools of a certain size range.
The research team included Dr Lucas Bluff, Dr Christian Rutz, Dr Alex Weir and Professor Alex Kacelnik from Oxford University's Department of Zoology, and Jolyon Troscianko from the University of Birmingham.
The work was funded by the UK's Biotechnology and Biological Sciences Research Council (BBSRC).
Story Source:
Adapted from materials provided by
University of Oxford.
Journal Reference:
Bluff et al. Tool use by wild New Caledonian crows Corvus moneduloides at natural foraging sites. Proceedings of The Royal Society B Biological Sciences, 2010; DOI:
10.1098/rspb.2009.1953

Polar Bear Droppings Advance Superbug Debate.

Researchers found little sign of superbugs in the droppings of polar bears that have had limited or no contact with humans, suggesting that the spread of antibiotic resistance genes seen in other animals may be the result of human influence. (Credit: iStockphoto/David Yang)
Source: ScienceDaily
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ScienceDaily (Jan. 15, 2010) — Scientists investigating the spread of antibiotic-resistant superbugs have gone the extra mile for their research -- all the way to the Arctic. Researchers writing in the open access journal BMC Microbiology found little sign of the microbes in the droppings of polar bears that have had limited or no contact with humans, suggesting that the spread of antibiotic resistance genes seen in other animals may be the result of human influence.
Trine Glad, from the University of Tromsø, Norway, led a study that examined feces samples from five polar bears and rectal swabs from another five polar bears between 2004 and 2006. She said, "The presence of antibiotic resistance genes has previously been described in bacteria taken from the feces of deer, foxes, pigs, dogs and cats. The Barents Sea population of polar bears is located in an area that is sparsely populated by humans. This enables us to study an ecosystem with little human impact and should allow us to determine whether these genes are naturally occurring or are caused by exposure to human antibiotics."
The researchers found that there was scant evidence of antibiotic resistance genes in the bacteria taken from these isolated bears. Overall, the bacterial diversity in the bears' feces was low. Speaking about these results, Glad said "Our analysis of polar bear feces showed a homogenous microbial flora dominated by Clostridia, most of them well characterized as they are also dominant in the human gut. These findings fit nicely with previous studies of the gut microbial ecology in mammals, indicating that bacterial diversity is lower in carnivores, such as polar bears that feed mostly on seals, than herbivores."
Story Source:
Adapted from materials provided by
BioMed Central, via EurekAlert!, a service of AAAS.
Journal Reference:
Trine Glad, Pal Bernhardsen, Kaare M Nielsen, Lorenzo Brusetti, Magnus Andersen, Jon Aars and Monica A Sundset. Bacterial diversity in faeces from polar bear (Ursus maritimus) in Arctic Svalbard. BMC Microbiology, (in press) [
link]

Friday, January 15, 2010

New System Helps Explain Salmon Migration.

DOE/Pacific Northwest National Laboratory researchers helped develop the Juvenile Salmon Acoustic Telemetry System to study the migration of juvenile salmon through fast-moving rivers. (Credit: Pacific Northwest National Laboratory)
Source: ScienceDaily
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ScienceDaily (Jan. 15, 2010) — A new acoustic telemetry system tracks the migration of juvenile salmon using one-tenth as many fish as comparable methods, suggests a paper published in the January edition of the American Fisheries Society journal Fisheries. The paper also explains how the system is best suited for deep, fast-moving rivers and can detect fish movement in more places than other tracking methods.
The Juvenile Salmon Acoustic Telemetry System (JSATS) estimated the survival of young, ocean-bound salmon more precisely than the widely used Passive Integrated Transponder (PIT) tags during a 2008 study on the Columbia and Snake rivers, according to the results of a case study discussed in the paper. The paper also concludes that fish behavior is affected least by light-weight JSATS tags compared to larger acoustic tags.
"Fisheries managers and researchers have many technologies to choose from when they study fish migration and survival," said lead author Geoff McMichael of the Department of Energy's Pacific Northwest National Laboratory.
"JSATS was specifically designed to understand juvenile salmon passage and survival through the swift currents and noisy hydroelectric dams on the Columbia River," McMichael continued. "But other systems might work better in different circumstances. This paper demonstrates JSATS' strengths and helps researchers weigh the pros and cons of the different fish tracking methods available today."
Scientists at PNNL and the U.S. Army Corps of Engineers' Portland District co-authored the paper. PNNL and NOAA Fisheries began developing JSATS for the Corps in 2001.
JSATS is an acoustic telemetry system that includes the smallest available acoustic transmitting tag, which weighs 0.43 grams. Its battery-powered tags are surgically implanted into juvenile salmon and send a uniquely coded signal every few seconds. Receivers are strategically placed in waterways to record the signal and track when and where tagged fish travel. A computer system also calculates the precise 3-D position of tagged fish using data gathered by the receivers.
PIT tags are also implanted into juvenile salmon for migration and survival studies, but don't use batteries to actively transmit signals. Instead, PIT tags send signals when they become energized while passing by PIT transceiver antennas.
For the paper's case study, researchers implanted 4,140 juvenile Chinook salmon with both JSATS and PIT tags. They also placed just PIT tags inside another 48,433 juveniles. All of the case study's tagged fish were released downstream of Lower Granite Dam on the Snake River in April and May 2008.
A significantly greater percentage of JSATS tags were detected than PIT tags, the case study demonstrated. For example, about 98 percent of JSATS-tagged fish were detected at Ice Harbor Dam on the Snake River. About 13 percent of PIT-tagged fish were detected in the same stretch of river. As a result, studies using JSATS require using roughly one-tenth as many fish as those employing PIT tags, which helps further conserve the salmon population.
Survival estimates were similar between JSATS and PIT tags. Forty-eight percent of the JSATS-tagged fish were estimated to have survived migration between Lower Granite Dam and Bonneville Dam, which is the last dam on the Columbia before the Pacific Ocean. For PIT-tagged fish, 43 percent were estimated to have reached the same area.
Having flexibility in where receivers can be placed is advantageous, the authors reported. JSATS receivers can be located in both rivers and dams, while PIT antennas usually can only go inside fish bypasses at dams. Researchers can estimate fish survival for an entire river system when receivers are placed in more locations, the paper explains.
The team also compared JSATS' technical features with those of another acoustic telemetry system, the VEMCO system being used for the Pacific Ocean Shelf Tracking (POST) project along North America's West Coast. The VEMCO system is best suited for use in the slow-moving, open ocean when observing small numbers of large fish, the authors wrote. In contrast, JSATS was developed to study the migration of larger quantities of small juvenile fish in fast-moving rivers.
A key difference between the JSATS and VEMCO systems is dry tag weight. JSATS tags weigh 0.43 grams and are the smallest acoustic tags available. VEMCO tags that have been used in Columbia River juvenile salmon weighed 3.1 grams. Previous research shows fish can bear a tag that weighs up to 6.7 percent of their body weight without significant adverse survival effects. That means JSATS tags can be implanted into fish as light as 6.5 grams, while VEMCO tags should be used in fish that weigh no less than 46.3 grams.
Another advantage of JSATS is that it is non-proprietary and available for anyone to manufacture or use. Because several companies have been able to competitively bid for the opportunity to produce the system's components, its cost has dropped in recent years. JSATS tags, for example, have gone from $300 per tag in 2005 to $215 in 2008. And JSATS tags cost $40 to $135 less than other commercially available acoustic tags in 2008. Proprietary interests have hindered the development of acoustic telemetry equipment in certain areas, the team wrote.
"JSATS has helped us get a clearer, more complete picture of how salmon migrate and survive through the Columbia and Snake rivers to the Pacific Ocean," McMichael said. "But we're continuing to develop JSATS and hope others will find it useful in studies of other aquatic animals. There's an opportunity for all aquatic telemetry technologies to be improved."
Story Source:
Adapted from materials provided by
DOE/Pacific Northwest National Laboratory.
Journal Reference:
G.A. McMichael, M.B. Eppard, T.J. Carlson, J.A. Carter, B.D. Ebberts, R.S. Brown, M. Weiland, G.R. Ploskey, R.A. Harnish and Z.D. Deng. The Juvenile Salmon Acoustic Telemetry System: A New Tool. Fisheries, Vol. 35, No. 1, January 2010

'World's Least Known Bird' Discovered Breeding in Afghanistan.

Researchers from the Wildlife Conservation Society have discovered the only known breeding area for the large-billed reed warbler, once called "the world's least known bird species." (Credit: WCS-Afghanistan)
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ScienceDaily (Jan. 15, 2010) — Researchers for the Wildlife Conservation Society have discovered for the first time the breeding area of the large-billed reed warbler -- dubbed in 2007 as "the world's least known bird species" -- in the remote and rugged Wakhan Corridor of the Pamir Mountains of north-eastern Afghanistan.
Using a combination of astute field observations, museum specimens, DNA sequencing, and the first known audio recording of the species, researchers verified the discovery by capturing and releasing almost 20 birds earlier this year, the largest number ever recorded.
A preliminary paper on the finding appears in the most recent edition of BirdingASIA. The authors include: Robert Timmins, Naqeebullah Mostafawi, Ali Madad Rajabi, Hafizullah Noori, Stephane Ostrowski and Colin Poole, of the Wildlife Conservation Society; Urban Olsson of Göteborg University, Sweden; and Lars Svensson.
The recent discovery of large-billed reed warblers in Afghanistan represents a watershed moment in the study of this bird, called in 2007 the world's least known bird species by BirdLife International. The first specimen was discovered in India in 1867, with more than a century elapsing before a second discovery of a single bird in Thailand in 2006.
"Practically nothing is known about this species, so this discovery of the breeding area represents a flood of new information on the large-billed reed warbler," said Colin Poole, Executive Director of WCS's Asia Program. "This new knowledge of the bird also indicates that the Wakhan Corridor still holds biological secrets and is critically important for future conservation efforts in Afghanistan."
The find serves as a case study in the detective work needed to confirm ornithological discoveries. The story begins in 2008, when Timmins was conducting a survey of bird communities along the Wakhan and Pamir Rivers. He immediately heard a distinctive song coming from a small, olive-brown bird with a long bill. Timmins taped the bird's song. He later heard and observed more birds of the same species.
Initially, Timmins assumed these birds to be Blyth's reed warblers, but a visit to a Natural History Museum in Tring, United Kingdom to examine bird skins resulted in a surprise: the observed birds were another species. Lars Svensson -- an expert on the family of reed warblers and familiar with their songs -- then realized that Timmins' tape was probably the first recording of the large-billed reed warbler.
The following summer (June 2009), WCS researchers returned to the site of Timmins' first survey, this time with mist nets used to catch birds for examination. The research team broadcast the recording of the song, a technique used to bring curious birds of the same species into view for observation and examination. The recording brought in large-billed reed warblers from all directions, allowing the team to catch almost 20 of them for examination and to collect feathers for DNA. Later lab work comparing museum specimens with measurements, field images, and DNA confirmed the exciting finding: the first-known breeding population of large-billed reed warblers.
WCS is currently the only organization conducting ongoing scientific conservation studies in Afghanistan -- the first such efforts in over 30 years -- and has contributed to a number of conservation initiatives and activities in partnership with the Afghanistan Government, with support from USAID (United States Agency for International Development). In 2009, the government of Afghanistan gazetted the country's first national park, Band-e-Amir, established with technical assistance from WCS's Afghanistan Program. WCS also worked with Afghanistan's National Environment Protection Agency (NEPA) in producing the country's first-ever list of protected species, an action that now bans the hunting of snow leopards, wolves, brown bears, and other species. In a related effort, WCS now works to limit illegal wildlife trade in the country through educational workshops for soldiers at Bagram Air Base and other military bases across Afghanistan.
Situated between the mountainous regions of the Pamirs in Tajikistan, Pakistan, and China, the Wakhan Corridor supports a surprisingly wide range of large mammal species, including Marco Polo sheep (or argali), ibex, lynx, wolf, and the elusive snow leopard.
Story Source:
Adapted from materials provided by
Wildlife Conservation Society, via EurekAlert!, a service of AAAS.

Alligators Breathe Like Birds, Study Finds.

Computerized tomographic (CT) X-ray images of side and top views of a 24-pound American alligator, with 3-D renderings of the bones and of airways or bronchi within the lungs. The windpipe and first-tier of bronchi are not shown. A University of Utah study found that air flows in one direction through a gator's lungs. It flows from the first-tier bronchi through second-tier bronchi (blue), then through tube-like third-tier parabronchi (not shown) and then back through other second-tier bronchi (forest green). (Credit: C.G. Farmer and Kent Sanders, University of Utah.)
Source: ScienceDaily
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ScienceDaily (Jan. 15, 2010) — University of Utah scientists discovered that air flows in one direction as it loops through the lungs of alligators, just as it does in birds. The study suggests this breathing method may have helped the dinosaurs' ancestors dominate Earth after the planet's worst mass extinction 251 million years ago.
Before and until about 20 million years after the extinction -- called "the Great Dying" or the Permian-Triassic extinction -- mammal-like reptiles known as synapsids were the largest land animals on Earth.
The extinction killed 70 percent of land life and 96 percent of sea life. As the planet recovered during the next 20 million years, archosaurs (Greek for "ruling lizards") became Earth's dominant land animals. They evolved into two major branches on the tree of life: crocodilians, or ancestors of crocodiles and alligators, and a branch that produced flying pterosaurs, dinosaurs and eventually birds, which technically are archosaurs.
By demonstrating one-way or "unidirectional" airflow within the lungs of alligators, the new study -- published in the Jan. 15 issue of the journal Science -- means that such a breathing pattern likely evolved before 246 million years ago, when crocodilians split from the branch of the archosaur family tree that led to pterosaurs, dinosaurs and birds.
That, in turn, means one-way airflow evolved in archosaurs earlier than once thought, and may explain why those animals came to dominance in the Early Triassic Period, after the extinction and when the recovering ecosystem was warm and dry, with oxygen levels perhaps as low as 12 percent of the air compared with 21 percent today.
"The real importance of this air-flow discovery in gators is it may explain the turnover in fauna between the Permian and the Triassic, with the synapsids losing their dominance and being supplanted by these archosaurs," says C.G. Farmer, the study's principal author and an assistant professor of biology at the University of Utah. "That's the major reason this is important scientifically."
Even with much less oxygen in the atmosphere, "many archosaurs, such as pterosaurs, apparently were capable of sustaining vigorous exercise," she adds. "Lung design may have played a key role in this capacity because the lung is the first step in the cascade of oxygen from the atmosphere to the animal's tissues, where it is used to burn fuel for energy."
Farmer emphasized the discovery does not explain why dinosaurs, which first arose roughly 230 million years ago, eventually outcompeted other archosaurs.
Farmer conducted the study -- funded by the National Science Foundation -- with Kent Sanders, an associate professor of radiology at the University of Utah School of Medicine. They performed CT scans of a 4-foot-long, 24-pound alligator.

'The Great Dying' -- Decline of the Synapsids, Rise of the Archosaurs:
The synapsids -- which technically include modern mammals -- occupied ecological niches for large animals before the Permian-Triassic extinction.
"Some got up to be bear-sized," says Farmer. Some were meat-eaters, others ate plants. They were four-footed and had features suggesting they were endurance runners. Their limbs were directly under their body instead of sprawling outward like a lizard's legs. There is evidence they cared for their young.
The cause of the mass extinction 251 million years ago is unknown; theories include massive volcanism, an asteroid hitting Earth and upwelling of methane gas that had been frozen in seafloor ice.
"A few of the synapsids survived the mass extinction to re-establish their dominance in the early Triassic, and the lineage eventually gave rise to mammals in the Late Triassic," says Farmer. "However, the recovery of life in the aftermath of the extinction involved a gradual turnover of the dominant terrestrial vertebrate lineage, with the archosaurs supplanting the synapsids by the Late Triassic."
From then until the dinosaurs died out 65 million years ago, any land animal longer than about 3 feet was an archosaur, says Farmer, while mammal-like synapsid survivors "were teeny little things hiding in cracks. It was not until the die-off of the large dinosaurs 65 million years ago that mammals made a comeback and started occupying body sizes larger than an opossum."
No one knows much about the archosaur that was the common ancestor of crocodilians and of pterosaurs, dinosaurs and birds, Farmer says.
It probably was "a small, relatively agile, insect-eating animal," Farmer says. Illustrations of early archosaurs look like large lizards.
"Our data provide evidence that unidirectional flow [of air in the lungs] predates the origin of pterosaurs, dinosaurs and birds, and evolved in the common ancestor of the crocodilian and bird [and pterosaur and dinosaur] lineages," Farmer says.

Cul-de-sacs or Loops for Airflow:
In the lungs of humans and other mammals, airflow is like the tides. When we inhale, the air moves through numerous tiers of progressively smaller, branching airways, or bronchi, until dead-ending in the smallest chambers, cul-de-sacs named alveoli, where oxygen enters the blood and carbon dioxide moves from the blood into the lungs.
It long has been known that airflow in birds is unidirectional, and some scientists suggest it also was that way in dinosaurs.
In modern birds, the lungs' gas exchange units are not alveoli, but tubes known as "parabronchi," through which air flows in one direction before exiting the lung. Farmer says this lung design helps birds fly at altitudes that would "render mammals comatose."
Some researchers have argued that unidirectional airflow evolved after crocodilians split from the archosaur family tree, arising among pterosaurs and theropod dinosaurs, the primarily meat-eating group that included Tyrannosaurus rex. Others have argued it arose only among coelurosaurs, a group of dinosaurs that also includes T. rex and feathered dinosaurs.
Unidirectional air flow in birds long has been attributed to air sacs in the lungs. But Farmer disagrees, since gators don't have air sacs, and says it's due to aerodynamic "valves" within the lungs. She believes air sacs help birds redistribute weight to control their pitch and roll during flight. Farmer says many scientists simply assume air sacs are needed for unidirectional airflow, and have pooh-poohed assertions to the contrary.
"They cannot argue with this data," she says. "I have three lines of evidence. If they don't believe it, they need to get an alligator and make their own measurements."

Assessing Airflow in Alligators:
Farmer did three experiments to demonstrate one-way airflow in alligators' lungs:
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She performed surgery on six anesthetized alligators and inserted flow meters called thermistors into the lungs to measure airflow speed and direction.
-Farmer pumped air in and out of lungs removed from four dead alligators sent to her by a wildlife refuge in Louisiana. The flow was monitored, showing the air kept going the same direction to loop through various tiers of bronchi and back to the trachea.
-Using lungs from another dead gator, she pushed and pulled water with tiny fluorescent beads through the lungs, making movies showing the unidirectional flow.
Farmer says the fact gator lungs still had unidirectional flow after being removed shows unidirectional airflow is caused by aerodynamic valves within the lungs, and not by some other factor, like air sacs or the liver, which acts like a piston to aid breathing.
How does air loop through an alligator's multichambered lungs?
Inhaled air enters the trachea, or windpipe, and then flows into two primary bronchi, or airways. Each of those primary bronchi enters a lung.
From those primary airways, the bronchi then branch into a second tier of narrower airways. Inflowing air jets past or bypasses the first branch in each lung because the branch makes a hairpin turn away from the direction of airflow, creating an aerodynamic valve. Instead, the air flows into other second-tier bronchi and then into numerous, tiny, third-tier airways named parabronchi, where oxygen enters the blood and carbon dioxide leaves it.
The air, still moving in one direction, then flows from the parabronchi into the bypassed second-tier bronchi and back to the first-tier bronchi, completing a one-way loop through the lungs before being exhaled through the windpipe.
Story Source:
Adapted from materials provided by
University of Utah.

Thursday, January 14, 2010

Unlocking the mystery of the duck-billed platypus' venom.

Despite its cuddly look, the male duck-billed platypus has stingers on its hind limbs that can deliver a painful venom. Scientists are unraveling its chemical composition. Credit: Wikimedia Commons.
Source: Physorg.com
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Abandon any notion that the duck-billed platypus is a soft and cuddly creature -- maybe like Perry the Platypus in the Phineas and Ferb cartoon.
This platypus, renowned as one of the few mammals that lay eggs, also is one of only a few venomous mammals. The males can deliver a mega-sting that causes immediate, excruciating pain, like hundreds of hornet stings, leaving victims incapacitated for weeks. Now scientists are reporting an advance toward deciphering the of the , with the first identification of a dozen protein building blocks. Their study is in the .
Masaki Kita, Daisuke Uemura, and colleagues note that spurs in the hind limb of the male platypus can deliver the venom, a cocktail of substances that cause excruciating pain. The scientists previously showed that the venom triggers certain chemical changes in cultured human nerve cells that can lead to the sensation of pain. Until now, however, scientists did not know the exact components of the venom responsible for this effect.
To unlock its secrets, the scientists collected samples of
venom and used high-tech analytical instruments to separate and characterize its components. They identified 11 new , or protein subunits, in the venom. Studies using nerve cells suggest that one of these substances, called Heptapeptide 1, is the main agent responsible for triggering pain. The substance appears to work by interacting with certain receptors in the nerve cells, they suggest.
More information: "Duck-Billed Platypus Venom Peptides Induce Ca2+ Influx in Neuroblastoma Cells",
http://pubs.acs.org/doi/full/10.1021/ja908148z
Provided by American Chemical Society.

From the Ancient Amazonian Indians: 'Biochar' as a Modern Weapon Against Global Warming.

Unlike familiar charcoal briquettes, above, biochar is charcoal made from wood, grass and other organic matter, and has the potential to help slow climate change. (Credit: iStockphoto/Don Nichols)
Source: ScienceDaily
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ScienceDaily (Jan. 14, 2010) — Scientists are reporting that "biochar" -- a material that the Amazonian Indians used to enhance soil fertility centuries ago -- has potential in the modern world to help slow global climate change. Mass production of biochar could capture and sock away carbon that otherwise would wind up in the atmosphere as carbon dioxide, the main greenhouse gas.
Their report appears in ACS' Environmental Science & Technology, a bi-weekly journal.
Kelli Roberts and colleagues note that biochar is charcoal produced by heating wood, grass, cornstalks or other organic matter in the absence of oxygen. The heat drives off gases that can be collected and burned to produce energy. It leaves behind charcoal rich in carbon.
Amazonian Indians mixed a combination of charcoal and organic matter into the soil to improve soil fertility, a fact that got the scientists interested in studying biochar's modern potential.
The study involved a "life-cycle analysis" of biochar production, a comprehensive cradle-to-grave look at its potential in fighting global climate change and all the possible consequences of using the material. It concludes that several biochar production systems have the potential for being an economically viable way of sequestering carbon -- permanently storing it -- while producing renewable energy and enhancing soil fertility.
Story Source:
Adapted from materials provided by
American Chemical Society, via EurekAlert!, a service of AAAS.
Journal Reference:
Roberts et al. Life Cycle Assessment of Biochar Systems: Estimating the Energetic, Economic, and Climate Change Potential. Environmental Science & Technology, 2010; 44 (2): 827 DOI:
10.1021/es902266r

Raft or Bridge: How Did Iguanas Reach Tiny Pacific Islands?

The Fijian crested iguana. (Credit: iStockphoto/Michelle Cottrill)
Source: ScienceDaily
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ScienceDaily (Jan. 14, 2010) — Scientists have long puzzled over how iguanas, a group of lizards mostly found in the Americas, came to inhabit the isolated Pacific islands of Fiji and Tonga. For years, the leading explanation has been that progenitors of the island species must have rafted there, riding across the Pacific on a mat of vegetation or floating debris. But new research in the January issue of The American Naturalist suggests a more grounded explanation.
Using the latest genetic, geological and fossil data, biologists Brice Noonan of the University of Mississippi and Jack Sites of Brigham Young University have found that iguanas may have simply walked to Fiji and Tonga when the islands were still a part of an ancient southern supercontinent.
The two islands, located about 2000 miles east of Australia, are home to several iguana species, and their presence there is "one of the most perplexing scenarios in island biogeography," Noonan says. The other islands in the region, and closest continental landmass, Australia, have no iguanid species at all. In fact the closest iguanids are found about 5,000 miles away in the Americas. So how did these species get to these remote islands?
Some scientists have hypothesized that they must have rafted there -- a journey of around 5,000 miles from South America to the islands. There is some precedent for rafting iguanas. There are documented cases of iguanas reaching remote Caribbean islands and the Galapagos Islands on floating logs. But crossing the Pacific is another matter entirely. Noonan and Sites estimate the trip would take six months or more -- a long time for an iguana to survive on a log or vegetation mat.
So Noonan and Sites tested the possibility that iguanas simply walked to the islands millions of years ago, before the islands broke off from Gondwana -- the ancient supercontinent made up of present-day Africa, Australia, Antarctica and parts of Asia. If that's the case, the island species would need to be old -- very old. Using "molecular clock" analysis of living iguana DNA, Noonan and Sites found that, sure enough, the island lineages have been around for more than 60 million years -- easily old enough to have been in the area when the islands were still connected via land bridges to Asia or Australia.
Fossil evidence backs the finding. Fossils uncovered in Mongolia suggest that iguanid ancestors did once live in Asia. Though there's currently no fossil evidence of iguanas in Australia, that doesn't necessarily mean they were never there. "[T]he fossil record of this continent is surprisingly poor and cannot be taken as evidence of true absence," the authors write.
So if the iguanas simply migrated to Fiji and Tonga from Asia or possibly Australia, why are they not also found on the rest of the Pacific islands? Noonan and Sites say fossil evidence suggests that iguana species did once inhabit other islands, but went extinct right around the time humans colonized those island. That's an indication that iguanas were on the menu for the early islanders. But Fiji and Tonga have a much shorter history of human presence, which may have helped the iguanas living there to escape extinction.
The molecular clock analysis combined with the fossil evidence suggests a "connection via drifting Australasian continental fragments that may have introduced [iguanas] to Fiji and Tonga," Noonan says. "The 'raft' they used may have been the land."
The researchers say that their study can't completely rule out the rafting hypothesis, but it does make the land bridge scenario "far more plausible than previously thought."
Story Source:
Adapted from materials provided by
University of Chicago Press Journals, via EurekAlert!, a service of AAAS.
Journal Reference:
Brice P. Noonan and Jack W. Sites Jr. Tracing the Origins of Iguanid Lizards and Boine Snakes of the Pacific. The American Naturalist, 2010; 175 (1): 61 DOI:
10.1086/648607

Understanding Why Leopards Can't Change Their Spots.

Leopard. The leopard cannot change its spots, nor can the tiger change its stripes, but new research tells us something about how cats end up with their spots and stripes. (Credit: iStockphoto/Dmitry Ersler)
Source: ScienceDaily
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ScienceDaily (Jan. 14, 2010) — The leopard cannot change its spots, nor can the tiger change its stripes, but a new research report published in the January 2010 issue of the journal Genetics tells us something about how cats end up with their spots and stripes. It demonstrates for the first time that at least three different genes are involved in the emergence of stripes, spots, and other markings on domestic cats.
Researchers have also determined the genomic location of two of these genes, which will allow for further studies that could shine scientific light on various human skin disorders.
"We hope that the study opens up the possibility of directly investigating the genes involved in pattern formation (i.e., the establishment of stripes, spots, and other markings) on the skin of mammals, including their structure, function, and regulation," said Eduardo Eizirik, a researcher involved in the work from the Pontifical Catholic University of Rio Grande do Sul, Brazil. "From these studies, we hope to understand how the different coat patterns have evolved in different mammalian groups, and to be able to investigate their roles in adaptation to different environments, such as their importance for camouflage in wild cat species."
Scientists crossed domestic cats with different coat patterns, such as stripes and blotches, and tracked the inheritance of these patterns among their offspring. Genetic samples were collected and used to type various molecular markers. Results showed that specific markers were inherited by a kitten every time a given coat pattern appeared, suggesting that the marker and the gene causing the coat pattern were located in the same region of the genome. Using statistical procedures called linkage mapping, scientists determined the genomic location of two genes involved in these traits. By clarifying the inheritance of markings in one mammalian species, researchers hope to identify and characterize the implicated genes and then determine if they apply to other mammals, such as humans. The hope is that this discovery will shed new light on human skin diseases that appear to follow standardized patterns.
"Coat color and markings of animals are obvious traits that have long attracted the interest of geneticists" said Mark Johnston, Editor-in-Chief of the journal GENETICS, "and this study in cats may ultimately help us better understand the genetics behind hair and skin color in other mammals. In turn, this understanding could lead to new therapeutic strategies to correct skin problems in people."
Story Source:
Adapted from materials provided by
Genetics Society of America, via EurekAlert!, a service of AAAS.
Journal Reference:
Eizirik et al. Defining and Mapping Mammalian Coat Pattern Genes: Multiple Genomic Regions Implicated in Domestic Cat Stripes and Spots. Genetics, 2010; 184 (1): 267 DOI:
10.1534/genetics.109.109629

Sunflower Genome Holds the Promise of Sustainable Agriculture.

Field of sunflowers. (Credit: iStockphoto)
Source: ScienceDaily
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ScienceDaily (Jan. 14, 2010) — As agricultural land becomes increasingly valuable, the need to maximize its utilization increases and decisions about what crops to plant and where, become paramount.
The sunflower family includes a number of valuable food crops, with sunflower seed production alone valued at about $14 billion annually. Yet the sunflower family is the only one of a handful of economically important plant families where a reference genome is not available to enable the breeding of crops better suited to their growing environment or consumers tastes.
A new research project, largely funded by Genome Canada, Genome BC, the US Departments of Energy and Agriculture, and France's INRA (National Institute for Agricultural Research), will create a reference genome for the sunflower family -- currently the world's largest plant family, containing 24,000 species of plants, including many crops, medicinal plants, horticulture plants and noxious weeds.
The US$10.5 million research project titled, Genomics of Sunflower, will use next-generation genotyping and sequencing technologies to sequence, assemble and annotate the sunflower genome and to locate the genes that are responsible for agriculturally important traits such as seed-oil content, flowering, seed-dormancy, and wood producing-capacity.
"The intent is to have the basis for a breeding program within four years," says project leader, Dr. Loren Rieseberg (University of British Columbia).
One of the potential applications of this research includes a hybrid variety of sunflower, grown as a dual-use crop. The wild Silverleaf species of sunflower, known for its tall, woody stalks that grow 10 to 15 feet tall and up to 4 inches in diameter in a single season, could be crossbred with the commercially valuable sunflower plant that produces high quality seeds, capitalizing on the desirable traits of both species.
"The seeds would be harvested for food and oil, while the stalks would be utilized for wood or converted to ethanol. As a dual-use crop it wouldn't be in competition with food crops for land," says project leader, Dr. Loren Rieseberg (University of British Columbia).
In addition, this fast growing annual crop will be highly drought resistant, thanks to desirable traits from the Silverleaf variety, and would therefore be suitable for use in subsistence agriculture in places like Sub-Saharan Africa, as well as in much of North America.
Dr. Nolan Kane (University of British Columbia) is one of the co-investigators on the project and together with colleagues at INRA in France, is doing much of the bioinformatics for the genome project.
"The sunflower genome is 3.5 billion letters long -- slightly larger than the human genome. The sunflower family is the largest plant family on earth -- encompassing several important crops and weeds. Mapping its genome will create a very useful reference template for the entire plant family, which will enable us to work on closely related species," says Kane.
Dr. Steve Knapp (University of Georgia) is another co-investigator on the project, whose work includes genetic mapping for desirable traits such as wood formation, as well as the development of germplasm for breeding. "The complete sequence will give us a full draft of the genome and eliminate the arduous one at a time process that we have been using up until this point," he says.
"Genome BC is very pleased to support this innovative project, which will capitalize on Canada's strong genomics infrastructure and leadership in Sunflower genomics, in collaboration with other experts worldwide," says Dr. Alan Winter, President and CEO of Genome BC. "The potential applications of this research are extremely important, both globally and locally."
Story Source:
Adapted from materials provided by
Genome BC.

Wednesday, January 13, 2010

Northern Forests Do Not Benefit from Lengthening Growing Season, Study Finds.

Forest in Finland. (Credit: iStockphoto/David Navrátil)
Source: ScienceDaily
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ScienceDaily (Jan. 13, 2010) — Forests in northern areas are stunted, verging on the edge of survival. It has been anticipated that climate change improves their growth conditions. A study published in Forest Ecology and Management journal shows that due to their genetic characteristics trees are unable to properly benefit from the lengthening growing season.
Furthermore, the researchers were surprised to find that the mortality of established trees considerably promotes the adaptation of forests to the changing environment.
In cooperation with colleagues at the Universities of Oulu and Potsdam, Anna Kuparinen, Docent at the University of Helsinki's Faculty of Biological and Environmental Sciences, simulated forest growth from southern to northern Finland. A meteorological dispersal model was applied to describe the spread of pollen and seeds in the atmosphere. Above all, the results illustrate the slowness of the adaptation process.
Generally, trees stop growing before the frosts and this cessation of growth has been programmed in their genotype. Therefore, trees are unable to effectively follow the increasing environmental growing season. Instead, they cease growth as dictated by their genotype. It is estimated that after hundred years from now northern forests will substantially lag behind the speed of growth that would be enabled by their environment.

Evolution is promoted by the mortality of established trees:
The researchers assumed that demographic characteristics of the trees would have a notable impact on their adaptability. Tree species differ for example so that birch matures at a considerably younger age than pine, and birch seeds spread more effectively than pine seeds. However, the results showed that these differences had only minor impacts. Instead, the mortality of established trees played a large role in the evolutionary adaptation.
The existing trees in northern forests will survive in a warmer climate better than before but, at the same time, they prevent genetically better adapted individuals from becoming more common. In a dense stand, old trees cast a shadow and prevent new seedlings from establishing. In this way, younger seedlings, which would be more suitable to warmer conditions, cannot easily progress beyond the sapling state.
A question closely related to environmental changes is, whether humans should help the populations to adapt? For forests, possible means of human aid include thinning and planting southern seeds to more northern locations.

Scientists Find Amazing New Pondlife on Nature Reserve.

The single-celled Plagiopyla. (Credit: Copyright B.J. Finlay)
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Source: ScienceDaily
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ScienceDaily (Jan. 13, 2010) — One year in to a project to save one of the UK's top sites for pondlife, amazing new species are being revealed for the first time.
Scientists from Queen Mary, University of London working with Dorset Wildlife Trust have discovered an astonishing variety of minute aquatic organisms, so small as to be invisible to the naked eye.
East Stoke Fen nature reserve is coming under the microscope of scientists from Queen Marys' School of Biological and Chemical Sciences, based at the Freshwater Biological Association's River Laboratory. They have already found over 30 species of invertebrates smaller than half a millimetre (so called meiofauna) and over 100 single-celled species (ciliates) in less than two months.
The reserve's reed fen, on the floodplain of the River Frome near Wool, is a rare and declining habitat in Dorset. Now, with funding from the Esmée Fairbairn Foundation, the Wet Fens Project is being launched to study 'cryptic biodiversity' (biodiversity invisible to the naked eye) and raise awareness so that it can be protected in pond and fen management.
Dr Genoveva Esteban of Queen Mary's School of Biological and Chemical Sciences, said: "Cryptic biodiversity helps natural ecosystems to bounce back in response to environmental change. The Wet Fens Project in partnership with Dorset Wildlife Trust and the Freshwater Biological Association is pioneer work in the UK, to link research with conservation practice with the aim of incorporating small organisms into wetland conservation management. Local biodiversity conservation will become all-embracing by covering the full range of aquatic organisms that contribute to the proper functioning of an ecosystem -- not just those judged as 'charismatic'."
Dr Rachel Janes, Dorset Wildlife Trust's Pond Project Co-ordinator, said: "It is very exciting to learn about these incredible animals on our reserve, thanks to the work of the scientific team. The Wet Fens Project will help to protect them for the future, alongside the more visible aquatic wildlife."
The Wet Fens Project will be launched this month at a seminar to celebrate the first year of the two-year Purbeck Important Ponds Project, which was launched in January 2009 by Dorset Wildlife Trust and funded by Biffaward -- a multi-million pound environment fund which utilises landfill tax credits donated by Biffa Waste Services, the Environment Agency and the Dorset AONB (Area of Outstanding Natural Beauty), to safeguard one of the UK's foremost regions for pond biodiversity. Purbeck ponds are an aquatic hotspot for wildlife, including nearly all of the known British dragonfly species as well as the rare great crested newt.
Story Source:
Adapted from materials provided by
Queen Mary, University of London.

Tilapia Feed on Fiji's Native Fish.

The poster child for sustainable fish farming -- the tilapia -- is actually a problematic invasive species for the native freshwater fish species of the Fiji Islands. (Credit: Aaron P. Jenkins)

Source: ScienceDaily
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ScienceDaily (Jan. 13, 2010) — The poster child for sustainable fish farming -- the tilapia -- is actually a problematic invasive species for the native fish of the islands of Fiji, according to a new study by the Wildlife Conservation Society and other groups.
Scientists suspect that tilapia introduced to the waterways of the Fiji Islands may be gobbling up the larvae and juvenile fish of several native species of goby, fish that live in both fresh and salt water and begin their lives in island streams.
The recently published paper appears in Aquatic Conservation: Marine and Freshwater Ecosystems. The authors include: Stacy Jupiter and Ingrid Qauqau of the Wildlife Conservation Society; Aaron P. Jenkins of Wetlands International-Oceania; and James Atherton of Conservation International.
"Many of the unique freshwater fishes of the Fiji Islands are being threatened by introduced tilapia and other forms of development in key water catchment basins," said Dr. Jupiter, a co-author of the study and one of the investigators examining the effects of human activities on the native fauna. "Conserving the native fishes of the islands will require a multi-faceted collaboration that protects not only the waterways of the islands, but the ecosystems that contain them."
The most surprising finding of the study centers on the tilapia, a member of the cichlid family of fishes from Africa that has become one of the most important kinds of fish for aquaculture, due in large part to its rapid rate of growth and palatability. Aside from its value as a source of protein, the tilapia is sometimes problematic to native fish species in tropical locations.
To gauge the impacts of tilapia and other human activities on native fish species in the Fiji Archipelago, researchers surveyed the fish species and other denizens of 20 river basins on the major islands of Vitu Levu, Vanua Levu, and Taveuni. In addition to catching and identifying fishes with gill and seine nets, the scientists also rated other environmental factors such as: the potential of erosion due to loss of forest cover and riparian vegetation; road density near rivers and streams; the distances and complexity of nearby mangroves and reefs; and the presence or absence of invasive species (tilapia mainly).
The team found that streams with tilapia contained 11 fewer species of native fishes than those without; species most sensitive to introduced tilapia included the throat-spine gudgeon, the olive flathead-gudgeon, and other gobies. In general, sites where tilapia were absent had more species of native fish.
Since tilapia are known to consume the larvae and juvenile fish, the researchers assume that the introduced species may be consuming the native ones as they make their way upstream and down. Absence of forest cover adjacent to streams was also correlated to fewer fish species.
Based on the spatial information compiled in the study, the researchers found that remote and undeveloped regions -- with waterways containing a full complement of native species and no tilapia -- on the three islands should be considered priority locations for management. The main management activities, the authors recommend, should include conserving forests around waterways and keeping the tilapia out.
"Protecting marine and aquatic biodiversity takes more than managing isolated rivers or coral reefs," said Dr. Caleb McClennen, Director of the Wildlife Conservation Society's Marine Program. "A holistic conservation approach is needed, one that incorporates freshwater systems, the surrounding forest cover, coastal estuaries and seaward coral reefs. As aquaculture continues to develop worldwide, best practices must include precautionary measures to keep farmed species out of the surrounding natural environment."
Story Source:
Adapted from materials provided by
Wildlife Conservation Society.

Tuesday, January 12, 2010

Green sea slug makes chlorophyll like a plant.

Source: Physorg.com
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The photosynthetic sea slug Elysia chlorotica appears like a dark green leaf as a result of retaining chloroplasts from its algal prey, Vaucheria litorea, in cells lining its digestive tract. Image credit: Mary S. Tyler/PNAS.
Scientists from the University of South Florida in Tampa have found a green sea slug is able to synthesize chlorophyll like a plant, which makes it the first animal known to be capable of the feat.
Researcher Sidney K. Pierce said the super green , Elysia chlorotica, which lives in waters on the east coast of the USA and Canada, is known to steal genes and photosynthesizing organelles called chloroplasts from its favorite intertidal algae species, Vaucheria litorea, but it now seems it has developed an entire chemical pathway to manufacture the green pigment " a" itself.
Chlorophyll is the pigment that captures energy from
in . Pierce and his team used radioactive tracing techniques to determine the slugs were manufacturing the chlorophyll themselves and it did not originate in the algae they ate.
A number of animals (such as corals) host microbes and algae and benefit from their photosynthesis, but in most of these associations the cells remain whole. In Elysia chlorotica, in contrast, the cells are broken down and chloroplasts are extracted and held inside the slug's own cells, where they remain active for the slug's lifetime of almost a year. Researchers have shown that once a young slug has eaten a meal of Vaucheria algae it never has to eat again as long as it has access to light and supplies of chlorophyll and other chemicals used in photosynthesis.
In 2007 scientists, including Pierce and his team, found genes related to photosynthesis in the slugs, and these genes, apparently originally from the algae, were even found in unhatched slugs that had never eaten algae. In the latest research Pierce found more algal genes, and some of them were for enzymes required for the chemical process manufacturing chlorophyll.
Pierce and his team studied slugs that had not eaten anything for at least five months and had stopped eliminating waste digestive products. They contained chloroplasts taken from the algae, but Pierce said that any other part of the
should have long ago been digested. They gave the slug an amino acid labeled with radioactive carbon and found that the radioactive carbon turned up in the chlorophyll a molecule after the slugs had been sunbathing, but not if they had been in the dark.
The findings were reported at the annual meeting of the Society for Integrative and Comparative Biology in Seattle, Washington on 7 January and will be published in the journal Symbiosis.

Melting Tundra Creating Vast River of Waste Into Arctic Ocean.

Source: ScienceDaily
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ScienceDaily (Jan. 12, 2010) — The increase in temperature in the Arctic has already caused the sea-ice there to melt. According to research conducted by the University of Gothenburg, if the Arctic tundra also melts, vast amounts of organic material will be carried by the rivers straight into the Arctic Ocean, resulting in additional emissions of carbon dioxide.
Several Russian rivers enter the Arctic Ocean particularly in the Laptev Sea north of Siberia. One of the main rivers flowing into the Laptev Sea is the Lena, which in terms of its drainage basin and length is one of the ten largest rivers in the world. The river water carries organic carbon from the tundra, and research from the University of Gothenburg shows that this adds a considerable amount of carbon dioxide to the atmosphere when it is degraded in the coastal waters.

Increased temperatures:
The increase in temperature in the Arctic, which has already made an impact in the form of reduced sea-ice cover during the summer, may also cause the permafrost to melt. "Large amounts of organic carbon are currently stored within the permafrost and if this is released and gets carried by the rivers out into the coastal waters, then it will result in an increased release of carbon dioxide to the atmosphere," says Sofia Hjalmarsson, native of Falkenberg and postgraduate student at the Department of Chemistry.

Study of two areas:
In her thesis, Sofia Hjalmarsson has studied the carbon system in two different geographical areas: partly in the Baltic Sea, the Kattegat and the Skagerrak, and partly in the coastal waters north of Siberia (the Laptev Sea, the East Siberian Sea and the Chukchi Sea). The two areas have in common the fact that they receive large volumes of river water containing organic carbon and nutrients, mainly nitrogen.
The thesis Carbon Dynamics in Northern Marginal Seas was publicly defended on 18 December.
Story Source:
Adapted from materials provided by
University of Gothenburg.

Butterflies Reeling from Impacts of Climate and Development.

Source: ScienceDaily
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ScienceDaily (Jan. 12, 2010) — California butterflies are reeling from a one-two punch of climate change and land development, says an unprecedented analysis led by UC Davis butterfly expert Arthur Shapiro.
The new analysis, scheduled to be published online the week of January 10 in the journal Proceedings of the National Academy of Sciences, gives insights on how a major and much-studied group of organisms is reacting to the Earth's warming climate.
"Butterflies are not only charismatic to the public, but also widely used as indicators of the health of the environment worldwide," said Shapiro, a professor of evolution and ecology. "We found many lowland species are being hit hard by the combination of warmer temperatures and habitat loss."
The results are drawn from Shapiro's 35-year database of butterfly observations made twice monthly at 10 sites in north-central California from sea level to tree line. The Shapiro butterfly database is unique in science for its combination of attributes: one observer (which reduces errors), very long-term, multiple sites surveyed often, a large number of species (more than 150), and attendant climatological data.
Shapiro's co-authors include three other UC Davis researchers and two former Shapiro graduate students, including lead analyst Matthew Forister, now an assistant professor of biology at the University of Nevada, Reno.
Their most significant findings:
Butterfly diversity (the number of different species present) is falling fast at all the sites near sea level. It is declining more slowly or holding roughly constant in the mountains, except at tree line.
At tree line, butterfly diversity is actually going up, as lower-elevation species react to the warming climate by moving upslope to higher, cooler elevations.
Diversity among high-elevation butterflies is beginning to fall as temperatures become uncomfortably warm for them and, Shapiro says, "There is nowhere to go except heaven."
Using a battery of statistical approaches, Shapiro and his colleagues concluded that climate change alone cannot account in full for the deteriorating low-elevation numbers. Land-use data show that the butterfly losses have been greatest where habitat has been converted from rural to urban and suburban types.
He added that one of the most surprising findings was that ruderal ("weedy") butterfly species that breed on "weedy" plants in disturbed habitats and are highly mobile are actually declining faster than "non-weedy" species -- those that specialize in one habitat type.
This is especially true in the mountains, where such species do not persist over winter but must recolonize every year from lower altitudes. As their numbers drop in the valleys, fewer are available to disperse uphill, and the rate of colonization drops.
"Butterfly folks generally consider these ruderal species to be 'junk species,' sort of the way bird watchers think of pigeons and starlings," said Shapiro. "So it came as a shock to discover that they were being hit even harder than the species that conservationists are used to thinking about.
"Some of the 'weedy' species have been touted as great success stories, in which native butterflies had successfully adapted to the changed conditions created by European colonization of California. That was the case for many decades, but habitat loss has apparently caught up with them now."
The study was funded by the National Science Foundation.
Additional authors are: at UC Davis, research scientist James Thorne in the Department of Environmental Science and Policy, and graduate students Joshua O'Brien in the Graduate Group in Ecology and David Waetjen in the Geography Graduate Group; at Denison University in Ohio, assistant professor Andrew McCall; and at the University of Tennessee at Knoxville, assistant professor Nathan Sanders and associate professor James Fordyce (another former Shapiro student).
The Shapiro database is online at
http://butterfly.ucdavis.edu. It includes butterfly observations and study site maps, together with climate data from nearby weather stations, descriptions of study sites and habitats, and numerous photos. The 10 survey sites lie along Interstate 80 and range from low-lying Suisun Marsh on San Francisco Bay to 9,103-foot-high Castle Peak near Donner Summit.
The database was made public in 2007, also with funding from the National Science Foundation.
Story Source:
Adapted from materials provided by
University of California - Davis.
Journal Reference:
1.Arthur Shapiro et al. Compounded effects of climate change and habitat alteration shift patterns of butterfly diversity. PNAS, January 11, 2010

Monday, January 11, 2010

New Species of Lichen Discovered in Iberian Peninsula.

Source: ScienceDaily
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ScienceDaily (Jan. 11, 2010) — Spanish scientists have described the lichen Phylloblastia fortuita, new to the Iberian Peninsula and to science. Another species from the same family, Phylloblastia dispersa, is also a new entry for Europe and is the first time it has been found outside the tropics.
Foliicolous lichens, symbiosis between fungi and algae, are organisms associated with tropical or sub-tropical climates, and their presence in environments such as the Iberian Peninsula, outside of the tropics, is associated with conditions of very stable ecological and environmental conditions
"We have identified three Phylloblastia lichens in the Iberian Peninsula, one of which is new to science (Phylloblastia fortuita), and we present a fourth species new to European flora, Phylloblastia dispersa," says Esteve Llop, main author and research at the Departamento de Biología Vegetal-Botánica [Department of Plant-Botanical Biology] of the University of Barcelona (UB).
Together, the scientists Esteve Llop and Antonio Gómez-Bolea analysed the lichen flora in a protected area near Barcelona. Although some species of lichen have already been recorded on leaves in the North East of the Iberian Peninsula, this is the first time new species have been described.
The study, recently published in The Lichenologist, brings together biological material that had not been identified by researchers in a previous study carried out in 2006, as well as new material related to previous samples. Llop points out that "the literature about the group to which the samples belong had increased because of contributions from intertropical zones with extratropical species."
The field of study where the lichens were found in Catalonia is also important for science. The presence of Phylloblastia fortuita in the Iberian Peninsula and of Phylloblastia dispersa in Europe reveals areas of "great sensitivity" to environmental changes and may serve as indicators of climatic change.
The biologist states that "we have found a new area with Foliicolous lichen flora, rich in important plant life, which, as in other locations, is associated with conditions of ecological and environmental stability," and concludes: "Scientists consider the importance of protecting these locations based on their relevance to ecology and biodervsity."
Story Source:
Adapted from materials provided by
FECYT - Spanish Foundation for Science and Technology, via EurekAlert!, a service of AAAS.
Journal Reference:
1.Llop, Esteve; Gómez-Bolea, Antonio. The lichen genus Phylloblastia ( Verrucariaceae) in the Iberian Peninsula, with a new species from Western Europe. The Lichenologist, 2009; 41 (6): 565 DOI:
10.1017/S002428290900872X

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New spider species discovered.

Source: Physorg.com
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The new species is the largest of its type in the Middle East, but its habitat is endangered. "It could be that there are other unknown species that will become extinct before we can discover them," says Dr. Uri Shanas of the University of Haifa, who is heading the research in the area. Credit: Photo by Yael Olek, courtesy of the University of Haifa
A new and previously unknown species of spider has been discovered in the dune of the Sands of Samar in the southern Arava region by a team of scientists from the Department of Biology in the University of Haifa-Oranim. Unfortunately, however, its habitat is endangered.

"The discovery of this new spider illustrates our obligation to preserve the dune," says Dr. Shanas, who headed the team of scientists.
The Sands of Samar are the last remaining
in Israeli territory in the southern Arava region. In the past, the sands stretched across some 7 square kilometers, but due to the rezoning of areas for agriculture and sand quarries, the sands have been reduced to fewer than 3 square kilometers.
During a course of studies that Dr. Shanas's research team has carried out in the region, they discovered this new spider, a member of the Cerbalus genus. Since it has been found in the Arava, it has been given the name Cerbalus aravensis. The researchers say that this spider's leg-span can reach up to 14 cm., which makes it the largest spider of its type in the Middle East. Even though details are still lacking to enable a full analysis of its biology and of its population in the sands, the scientists know that this is a nocturnal spider, mostly active in the hottest months of the year, and that it constructs an underground den which is closed with a "lifting door" made of sand particles that are glued together to camouflage the den.
The scientists' excitement is indeed mixed with apprehension. According to Dr. Shanas, the Israel Land Administration intends to renew mining projects in the Sands of Samar in the near future, which will endanger the existence of the newly discovered . He adds that it is possible that there are additional unknown living in the sands, and therefore efforts should be made to preserve this unique region in the Arava. "The new discovery shows how much we still have to investigate, and that there are likely to be many more species that are unknown to us. If we do not preserve the few habitats that remain for these species, they will become extinct before we can even discover them," Dr. Shanas concludes.

Provided by University of Haifa

Sunday, January 10, 2010

Warmer Climate Could Stifle Carbon Uptake by Trees, Study Finds.

Source: ScienceDaily
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ScienceDaily (Jan. 8, 2010) — Contrary to conventional belief, as the climate warms and growing seasons lengthen subalpine forests are likely to soak up less carbon dioxide, according to a new University of Colorado at Boulder study.
As a result, more of the greenhouse gas will be left to concentrate in the atmosphere.
"Our findings contradict studies of other ecosystems that conclude longer growing seasons actually increase plant carbon uptake," said Jia Hu, who conducted the research as a graduate student in CU-Boulder's ecology and evolutionary biology department in conjunction with the university's Cooperative Institute for Research in Environmental Sciences, or CIRES.
The study will be published in the February edition of the journal Global Change Biology.
Working with ecology and evolutionary biology professor and CIRES Fellow Russell Monson, Hu found that while smaller spring snowpack tended to advance the onset of spring and extend the growing season, it also reduced the amount of water available to forests later in the summer and fall. The water-stressed trees were then less effective in converting CO2 into biomass. Summer rains were unable to make up the difference, Hu said.
"Snow is much more effective than rain in delivering water to these forests," said Monson. "If a warmer climate brings more rain, this won't offset the carbon uptake potential being lost due to declining snowpacks."
Drier trees also are more susceptible to beetle infestations and wildfires, Monson said.
The researchers found that even as late in the season as September and October, 60 percent of the water in stems and needles collected from subalpine trees along Colorado's Front Range could be traced back to spring snowmelt. They were able to distinguish between spring snow and summer rain in plant matter by analyzing slight variations in hydrogen and oxygen atoms in the water molecules.
The results suggest subalpine trees like lodgepole pine, subalpine fir and Englemann spruce depend largely on snowmelt, not just at the beginning of the summer, but throughout the growing season, according to the researchers.
"As snowmelt in these high-elevation forests is predicted to decline, the rate of carbon uptake will likely follow suit," said Hu.
Subalpine forests currently make up an estimated 70 percent of the western United States' carbon sink, or storage area. Their geographic range includes much of the Rocky Mountains, Sierra Nevada and high-elevation areas of the Pacific Northwest.
Study co-authors included David Moore of King's College London and Sean Burns of the National Center for Atmospheric Research and CU-Boulder.
CIRES is a joint institute of CU-Boulder and the National Oceanic and Atmospheric Administration. For more information about CIRES visit
cires.colorado.edu.
Story Source:
Adapted from materials provided by
University of Colorado at Boulder.
Journal Reference:
1.Jia Hu, David J. P. Moore, Sean P. Burns, Russell K. Monson. Longer growing seasons lead to less carbon sequestration by a subalpine forest. Global Change Biology, 2010; 16 (2): 771 DOI:
10.1111/j.1365-2486.2009.01967.x

Echinoderms Contribute to Global Carbon Sink; Impact of Marine Creatures Underestimated.

Source: ScienceDaily
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ScienceDaily (Jan. 9, 2010) — The impact on levels of carbon dioxide in the Earth's atmosphere by the decaying remains of a group of marine creatures that includes starfish and sea urchin has been significantly underestimated.
"Climate models must take this carbon sink into account," says Mario Lebrato, lead author of the study. The work was done when he was at the National Oceanography Centre, Southampton (NOCS) and affiliated with the University of Southampton's School of Ocean and Earth Science (SOES); he is now at the Leibniz Institute of Marine Science in Germany.
Globally, the seabed habitats occupy more than 300 million million square metres, from the intertidal flats and pools to the mightiest deep-sea trenches at 11,000 meters. The benthos -- the animals living on and in the sediments -- populate this vast ecosystem.
Calcifying organisms incorporate carbon directly from the seawater into their skeletons in the form of inorganic minerals such as calcium carbonate. This means that their bodies contain a substantial amount of inorganic carbon. When they die and sink, some of the inorganic carbon is remineralised, and much of it becomes buried in sediments, where it remains locked up indefinitely.
Lebrato and his colleagues provide the first estimation of the contributions of starfish, sea urchins, brittle stars, sea cucumbers and sea lilies -- all kinds of echinoderm -- to the calcium carbonate budget at the seabed. They estimate that the global production from all echinoderms is over a tenth (0.1) of a gigatonne of carbon per year -- that is, more than a hundred thousand million kilograms.
This is less than the total biological production in the main water column, or pelagic zone, which scientists believe to be between around 0.6 and 1.8 gigatonnes of carbon per year. But echinoderms apparently deliver more carbon to the sediments than do forams, for example. These microscopic animals live in vast numbers in the oceans and are traditionally regarded along with coccolithophores (single-celled marine plants surrounded by calcium carbonate plates) as one of the biggest contributors to the flux of calcium carbonate from the sunlit surface waters to the ocean's interior -- the so-called 'biological carbon pump'.
"Our research highlights the poor understanding of large-scale carbon processes associated with calcifying animals such as echinoderms and tackles some of the uncertainties in the oceanic calcium carbonate budget," says Lebrato: "The realisation that these creatures represent such a significant part of the ocean carbon sink needs to be taken into account in computer models of the biological pump and its effect on global climate."
There is a worry that ocean acidification due to increased carbon dioxide emissions from the burning of fossil fuels could reduce the amount of calcium carbonate incorporated into the skeletons of echinoderms and other calcifying organisms.
However, different echinoderm species respond to ocean acidification in different ways, and the effects of rising temperatures can be as significant as those of rising carbon dioxide. How this will affect the global carbon sink remains to be established.
Lebrato concludes: "The scientific community needs to reconsider the role of benthic processes in the marine calcium carbonate cycle. This is a crucial but understudied compartment of the global marine carbon cycle, which has been of key importance throughout Earth history and it is still at present."
The authors are: Mario Lebrato (NOCS/SOES), Debora Iglesias-Rodríguez (NOCS/SOES), Richard Feely (Pacific Marine Environmental Laboratory/National Oceanic and Atmospheric Administration,, Seattle), Dana Greeley (NOCS/SOES), Daniel Jones (NOCS), Nadia Suarez-Bosche (NOCS/SOES), Richard Lampitt (NOCS), Joan Cartes (Institut de Ciències del Mar de Barcelona), Darryl Green (NOCS) and Belinda Alker (NOCS).
Story Source:
Adapted from materials provided by
National Oceanography Centre, Southampton (UK), via EurekAlert!, a service of AAAS.

Ant Has Given Up Sex Completely, Researchers Confirm.

Source: ScienceDaily
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ScienceDaily (Jan. 9, 2010) — The complete asexuality of a widespread fungus-gardening ant, the only ant species in the world known to have dispensed with males entirely, has been confirmed by a team of Texas and Brazilian researchers.
Most social insects—the wasps, ants and bees—are relatively used to daily life without males. Their colonies are well run by swarms of sterile sisters lorded over by an egg-laying queen. But, eventually, all social insect species have the ability to produce a crop of males who go forth in the world to fertilize new queens and propagate.
Queens of the ant Mycocepurus smithii reproduce without fertilization and males appear to be completely absent, report Christian Rabeling, Ulrich Mueller and their Brazilian colleagues in PLoS ONE this week.
"Animals that are completely asexual are relatively rare, which makes this is a very interesting ant," says Rabeling, an ecology, evolution and behavior graduate student at The University of Texas at Austin. "Asexual species don't mix their genes through recombination, so you expect harmful mutations to accumulate over time and for the species to go extinct more quickly than others. They don't generally persist for very long over evolutionary time."
Previous studies of the ants from Puerto Rico and Panama have pointed toward the ants being completely asexual. One study in particular, by Mueller and former graduate student Anna Himler (now at Arizona State University), showed that the ants reproduced in the lab without males, and that no amount of stress induced the production of males.
Scientists believed that specimens of male ants previously collected in Brazil in the 1960s could be males of M. smithii. If males of the species existed, it would suggest that—at least from time to time—the ants reproduce sexually.
Rabeling analyzed the males in question and discovered that they belonged to another closely related (sexually reproducing) species of fungus-farmer, Mycocepurus obsoletus, thus establishing that no males are known to exist for M. smithii.
He also dissected reproducing M. smithii queens from Brazil and found that their sperm storage organs were empty.
Taken together with the previous studies of the ants, Rabeling and his colleagues have concluded that the species is very likely to be totally asexual across its entire range, from Northern Mexico through Central America to Brazil, including some Caribbean islands.
As for the age of the species, the scientists estimate the ants could have first evolved within the last one to two million years, a very young species given that the fungus-farming ants evolved 50 million years ago.
Rabeling says he is using genetic markers to study the evolution and systematics of the fungus-gardening ants and this will help determine the date of the appearance and genetic mechanism of asexual reproduction more precisely in the near future.
Story Source:
Adapted from materials provided by
University of Texas at Austin, via EurekAlert!, a service of AAAS.